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original article |
Date |
Title |
Authors Max. 6 Authors |
| 1 |
[GO] |
2026―Jul―11 |
Clinical presentation and detection of SARS-CoV-2, influenza-A/B among patients with upper respiratory tract infections in a tertiary hospital in Pune: a pilot study |
Priyanka Jali, Varsha Potdar, Anil Pardeshi, Poonam Suryawanshi, Madhura Gandhi, Shrishail Sarawade, Shubhangi Kanitkar, Vikram Vikhe, Madhusudan Barthwal, Sachin Dole, Hanumant Chavan, Ratnakar Parag, Divya Bhattad, Sheetal Jadhav, Veena Vipat, Srikanth Tripathy |
| 2 |
[GO] |
2026―Jul―06 |
A population-based retrospective machine learning study of COVID-19 severity using integrated clinical and viral genomic data in Jiangsu Province, China |
Xueyin Mei, Sidu Feng, Wanrong Xie, Yi Sun, Liqing Wang, Xue Lin, Huiyan Yu, Jian Li, Liguo Zhu |
| 3 |
[GO] |
2026―Jun―27 |
Genetic and biological characterization of a reassortant H3N2 swine influenza virus isolated in China with internal genes from the 2009 pandemic H1N1 |
Xuan Zhou, Lili Sun, Jingjing Yang, Chenlu Xia, Yuzhong Zhao |
| 4 |
[GO] |
2026―May―26 |
Risk factors and outcomes of secondary co-infections in hospitalised COVID-19 patients in Malaysia: a case control study |
Nurfarah Lydia Hambali, Nik Mohd Noor Nik Zuraina, Yean Yean Chan, Zakuan Zainy Deris, Wei Chuan Chua |
| 5 |
[GO] |
2026―Feb―14 |
SARS-CoV-2 Infection disrupts lower respiratory tract microbiome function and interactions |
Heryk Motta, Ana Paula A. Perin, Giovana Flávia Rosin, Júlia Catarina Vieira Reuwsaat, Iago Mocelin, Fernanda Cortez Lopes, Fabiana Quoos Mayer, Vanise Pereira de Medeiros, Ilma Simoni Brum, Ludmila Fiorenzano Baethgen, Tatiana Schäffer Gregianini, Charley Christian Staats, Marilene Henning Vainstein, Lívia Kmetzsch |
| 6 |
[GO] |
2026―Jan―03 |
Validation of a multiplex qRT-PCR assay for the detection of RSV, influenza A/B virus and SARS-CoV-2 |
Alihan Bulgurcu, Ayça Arzu Sayıner |
| 7 |
[GO] |
2025―Nov―26 |
High colonization by multidrug-resistant and virulent Staphylococcus aureus genotypes among critically ill patients in the COVID-19 pandemic in a Brazilian hospital |
Tamara Lopes Rocha De Oliveira, Thaís Campos Macharete, Evellyn Max Guedes, Gabriel Freire Igari, Andryelle Cristina de Sant’Ana, Adriana Lúcia Pires Ferreira, Fernanda Sampaio Cavalcante, Claudia Regina da Costa de Souza, Simone Aranha Nouér, Kátia Regina Netto Dos Santos, Anna Carla Castiñeiras, Christiany Moçali Gonzalez, Joana Pantoja Freire, Luiz Felipe Abreu Guimarães, Vânia Carvalho Ávila |
| 8 |
[GO] |
2025―Nov―14 |
Antimicrobial resistance patterns and molecular characterization of Acinetobacter baumannii isolates in non-COVID-19 patients admitted to intensive care units during the pandemic: a retrospective study at a tertiary hospital in Tehran, Iran |
Mahsa Ghamari, Fereshteh Jabalameli, Mohammad Emaneini, Reza Beigverdi |
| 9 |
[GO] |
2025―Oct―02 |
Virulence factors of Candida spp. isolated from COVID-19 patients: hydrolytic enzyme activity and biofilm formation |
Ahmad Jabrodini, Somayeh Yazdanpanah, Mina Malekzadeh, Shafigheh Shabanzadeh, Maryam Ahmadyan, Keyvan Pakshir, Kamiar Zomorodian |
| 10 |
[GO] |
2025―Aug―01 |
Screening and identification of host factors interacting with the nucleocapsid protein of SARS-CoV-2 omicron variant using the yeast two-hybrid system |
Chunhua Wang, Tingyu Yu, Moyue Xie, Dongang Zhan, Shuaijie Zhang, Wenqi Chai, Jianzhong Zhao, Lijuan Yin, Yang Yang, Liang Shen, Ying Xia |
| 11 |
[GO] |
2025―May―22 |
Secondary bacterial infections of Carbapenem-Resistant Acinetobacter baumannii in patients with COVID-19 admitted to Chinese ICUs |
Fuhong Chen, Jia Lin, Wei Yang, Jie Chen, Xiang Qian, Tao Yan, Xiuping Liu, Yewei Lu, Qi Chen |
| 12 |
[GO] |
2025―May―15 |
Taurultam shows antiviral activity against SARS-CoV-2 and influenza virus |
Rongbo Luo, Beilei Shen, Bingshuo Qian, Lingjun Fan, Junkui Zhang, Xiuwen Deng, Yan Sun, Shijun Zhang, Tiecheng Wang, Yuanguo Li, Weiyang Sun, Xiaobin Pang, Wu Zhong, Yuwei Gao |
| 13 |
[GO] |
2025―Mar―17 |
Correction: Antimicrobial resistance patterns of WHO priority pathogens at general hospital in Southern Ethiopia during the COVID-19 pandemic, with particular reference to ESKAPE-group isolates of surgical site infections |
Mohammed Seid, Berari Bayou, Addis Aklilu, Dagimawie Tadesse, Aseer Manilal, Abdurezak Zakir, Kebede Kulyta, Teshome Kebede, Hissah Abdulrahman Alodaini, Akbar Idhayadhulla |
| 14 |
[GO] |
2025―Feb―22 |
Antimicrobial resistance patterns of WHO priority pathogens at general hospital in Southern Ethiopia during the COVID-19 pandemic, with particular reference to ESKAPE-group isolates of surgical site infections |
Mohammed Seid, Berari Bayou, Addis Aklilu, Dagimawie Tadesse, Aseer Manilal, Abdurezak Zakir, Kebede Kulyta, Teshome Kebede, Hissah Abdulrahman Alodaini, Akbar Idhayadhulla |
| 15 |
[GO] |
2025―Jan―28 |
Changes in incidence and epidemiology of antimicrobial resistant pathogens before and during the COVID-19 pandemic in Germany, 2015-2022 |
Jonathan H. J. Baum, Achim Dörre, Felix Reichert, Ines Noll, Marcel Feig, Tim Eckmanns, Mirco Sandfort, Sebastian Haller |
| 16 |
[GO] |
2024―Aug―05 |
Large-scale genetic correlation studies explore the causal relationship and potential mechanism between gut microbiota and COVID-19-associated risks |
He Li, Jie Wen, Xiangbin Zhang, Ziyu Dai, Mingren Liu, Hao Zhang, Nan Zhang, Ruoyan Lei, Peng Luo, Jingwei Zhang |
| 17 |
[GO] |
2024―Apr―24 |
The characteristics of microbiome in the upper respiratory tract of COVID-19 patients |
Xilong Zhang, Nadira Nurxat, Jueraiti Aili, Yakupu Yasen, Qichen Wang, Qian Liu |
| 18 |
[GO] |
2024―Apr―10 |
Characterization of genes related to the efflux pump and porin in multidrug-resistant Escherichia coli strains isolated from patients with COVID-19 after secondary infection |
Aryan R. Ganjo, Salah Tofik Jalal Balaky, Ahang Hasan Mawlood, Sakar B. Smail, Nazar P. Shabila |
| 19 |
[GO] |
2024―Jan―22 |
Genetic approach toward linkage of Iran 2012-2016 cholera outbreaks with 7th pandemic Vibrio cholerae |
Fatemeh Jalalizadeh, Elisabeth Njamkepo, François-Xavier Weill, Forough Goodarzi, Marjan Rahnamaye-Farzami, Roghieh Sabourian, Bita Bakhshi |
| 20 |
[GO] |
2024―Jan―20 |
Insights into estrogen impact in oral health & microbiome in COVID-19 |
Rubén Alberto Bayardo-González, Marcela Peña-Rodríguez, Ana Laura Pereira-Suárez, Alina Xcaret Rubio-Sánchez, Mariel García-Chagollán, Daniel Natividad Valenzuela-Orozco, Melida del Rosario Lizarazo-Taborda, Jesús Mora-Mora, Natali Vega-Magaña |
| 21 |
[GO] |
2024―Jan―03 |
Association of gut microbiota with the pathogenesis of SARS-CoV-2 Infection in people living with HIV |
Aya Ishizaka, Michiko Koga, Taketoshi Mizutani, Seiya Yamayoshi, Kiyoko Iwatsuki-Horimoto, Eisuke Adachi, Yutaka Suzuki, Yoshihiro Kawaoka, Hiroshi Yotsuyanagi |
| 22 |
[GO] |
2023―Nov―11 |
Development of a robust TaqMan probe-based one-step multiplex RT-qPCR for simultaneous detection of SARS-CoV-2 and Influenza A/B viruses |
Hamidreza Abbasi, Hadi Razavi Nikoo, Fatemeh Fotouhi, Ayyoob Khosravi |
| 23 |
[GO] |
2023―Oct―28 |
Immunized mice naturally process in silico-derived peptides from the nucleocapsid of SARS-CoV-2 |
Mario Aldair Campos-Ruíz, Berenice Illades-Aguiar, Oscar Del Moral-Hernández, Mariana Romo-Castillo, Marcela Salazar-García, Mónica Espinoza-Rojo, Amalia Vences-Velázquez, Karen Cortés-Sarabia, Victor M. Luna-Pineda |
| 24 |
[GO] |
2023―Aug―24 |
Occurrence of Acinetobacter baumannii genomic resistance islands (AbGRIs) in Acinetobacter baumannii strains belonging to global clone 2 obtained from COVID-19 patients |
Ghazal Naderi, Mahla Asadian, Pegah Afarinesh Khaki, Mohammadreza Salehi, Alireza Abdollahi, Masoumeh Douraghi |
| 25 |
[GO] |
2023―Jul―17 |
A mutation responsible for impaired detection by the Xpert SARS-CoV-2 assay independently emerged in different lineages during the SARS-CoV-2 pandemic |
Daniel Peñas-Utrilla, Amadeo Sanz, Pilar Catalán, Cristina Veintimilla, Luis Alcalá, Roberto Alonso, Patricia Muñoz, Laura Pérez-Lago, Darío García de Viedma, Teresa Aldámiz, Ana Álvarez-Uría, Elena Bermúdez, Emilio Bouza, Sergio Buenestado-Serrano, Almudena Burillo, Raquel Carrillo, Pilar Catalán, Emilia Cercenado, Alejandro Cobos, Cristina Díez, Pilar Escribano, Agustín Estévez, Chiara Fanciulli, Alicia Galar, Mª Dolores García, Paloma Gijón, Helmuth Guillén, Jesús Guinea, Marta Herranz, Álvaro Irigoyen, Martha Kestler, Juan Carlos López, Marina Machado, Mercedes Marín, Pablo Martín-Rabadán, Andrea Molero-Salinas, Pedro Montilla, Belén Padilla, Rosalía Palomino-Cabrera, María Palomo, María Jesús Pérez-Granda, Leire Pérez, Elena Reigadas, Cristina Rincón, Belén Rodríguez, Sara Rodríguez, Cristina Rodríguez-Grande, Adriana Rojas, María Jesús Ruiz-Serrano, Carlos Sánchez, Mar Sánchez, Julia Serrano, Francisco Tejerina, Maricela Valerio, Mª Cristina Veintimilla, Lara Vesperinas, Teresa Vicente, Sofía de la Villa |
| 26 |
[GO] |
2023―May―09 |
Characterization of oral bacterial and fungal microbiome in recovered COVID-19 patients |
Nana Wei, Guangqi Zhu, Tingxiao Zhao, Yan Wang, Haifei Lou, Haoxuan Li, Zhejuan Yang, Zheen Zhang, Qiujing Wang, Mingfang Han, Zhibing Lin, Shibo Li |
| 27 |
[GO] |
2023―Mar―29 |
Investigation of antimicrobial resistance patterns and molecular typing of Pseudomonas aeruginosa isolates among Coronavirus disease-19 patients |
Somaye Shiralizadeh, Fariba Keramat, Seyyed Hamid Hashemi, Mohammad Mehdi Majzoobi, Masoud Azimzadeh, Mohammad Sina Alikhani, Pezhman Karami, Zahra Rahimi, Mohammad Yousef Alikhani |
| 28 |
[GO] |
2023―Mar―07 |
Rapid, sensitive, and specific detection of SARS-CoV-2 in nasopharyngeal swab samples of suspected patients using a novel one-step loop-mediated isothermal amplification (one-step LAMP) technique |
Sayyad Khanizadeh, Asra Malekshahi, Hooman Hanifehpour, Mehdi Birjandi, Shirzad Fallahi |
| 29 |
[GO] |
2023―Jan―25 |
Antibiotic resistance profile of common uropathogens during COVID-19 pandemic: hospital based epidemiologic study |
Ahmed M. Abdel Gawad, Walaa Mohamed Omar Ashry, Sherief El-Ghannam, Mahmoud Hussein, Ahmed Yousef |
| 30 |
[GO] |
2022―Nov―14 |
Meta-analysis of 16S rRNA microbial data identified alterations of the gut microbiota in COVID-19 patients during the acute and recovery phases |
Xiaomin Cheng, Yali Zhang, Yifan Li, Qin Wu, Jiani Wu, Soo-Kyung Park, Cheng Guo, Jiahai Lu |
| 31 |
[GO] |
2022―Mar―10 |
Unsupervised explainable AI for molecular evolutionary study of forty thousand SARS-CoV-2 genomes |
Yuki Iwasaki, Takashi Abe, Kennosuke Wada, Yoshiko Wada, Toshimichi Ikemura |
| 32 |
[GO] |
2022―Feb―03 |
Development and multi-center clinical trials of an up-converting phosphor technology-based point-of-care (UPT-POCT) assay for rapid COVID-19 diagnosis and prediction of protective effects |
Pingping Zhang, Baisheng Li, Yao Wang, Wei Min, Xiaohui Wang, Yugui Zhou, Zhencui Li, Yong Zhao, Huan Zhang, Min Jiang, Huanying Zheng, Chao Yang, Wei Zhang, Le Zuo, Qi Gao, Zhengrong Yang, Yanzhao Li, Tiejian Feng, Changqing Lin, Qinghua Hu, Tie Song, Ruifu Yang |
| 33 |
[GO] |
2021―Dec―18 |
IgG antibody titers against SARS-CoV-2 nucleocapsid protein correlate with the severity of COVID-19 patients |
Li Yang, Qiang Xu, Bin Yang, Jiayu Li, Rong Dong, Jingjing Da, Zhixu Ye, Yongjie Xu, Hourong Zhou, Xiangyan Zhang, Lin Liu, Yan Zha, Fuxun Yu |
| 34 |
[GO] |
2021―Oct―11 |
Beware of pharyngeal Fusobacterium nucleatum in COVID-19 |
Lirong Bao, Cheng Zhang, Jinglu Lyu, Caixia Yan, Ranran Cao, Ming Pan, Yan Li |
| 35 |
[GO] |
2021―Sep―06 |
An optimised protocol for detection of SARS-CoV-2 in stool |
Tianqi Li, Enriqueta Garcia-Gutierrez, Daniel A. Yara, Jacob Scadden, Jade Davies, Chloe Hutchins, Alp Aydin, Justin O’Grady, Arjan Narbad, Stefano Romano, Lizbeth Sayavedra |
| 36 |
[GO] |
2021―Jun―26 |
A newly identified linear epitope on non-RBD region of SARS-CoV-2 spike protein improves the serological detection rate of COVID-19 patients |
Yunwen Zhang, Zhengrong Yang, Sicheng Tian, Baisheng Li, Tiejian Feng, Jianfan He, Min Jiang, Xiujuan Tang, Shujiang Mei, Hao Li, Yifan Zhong, Guilian Li, Mingyuan Tang, Sijing Liu, Tian Tang, Chuan Wang, Xiaohui Wang |
| 37 |
[GO] |
2021―Mar―23 |
Human cell-dependent, directional, time-dependent changes in the mono- and oligonucleotide compositions of SARS-CoV-2 genomes |
Yuki Iwasaki, Takashi Abe, Toshimichi Ikemura |
| 38 |
[GO] |
2021―Feb―22 |
Identification and functional analysis of the SARS-COV-2 nucleocapsid protein |
Tianyi Gao, Yingdong Gao, Xiangxiang Liu, Zhenlin Nie, Huilin Sun, Kang Lin, Hongxin Peng, Shukui Wang |
| 39 |
[GO] |
2021―Feb―20 |
Detection of SARS-CoV-2 in fecal samples with different pretreatment methods and PCR kits |
Ranran Cao, Lirong Bao, Ming Pan, Cheng Zhang, Hongyu Liao, Li Liu, Yan Li, Mingyuan Li |
| 40 |
[GO] |
2021―Jan―22 |
Combined oropharyngeal/nasal swab is equivalent to nasopharyngeal sampling for SARS-CoV-2 diagnostic PCR |
Tania Desmet, Peter De Paepe, Jerina Boelens, Liselotte Coorevits, Elizaveta Padalko, Stien Vandendriessche, Isabel Leroux-Roels, Annelies Aerssens, Steven Callens, Eva Van Braeckel, Thomas Malfait, Frank Vermassen, Bruno Verhasselt |
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