| |
original article |
Date |
Title |
Authors Max. 6 Authors |
| 1 |
[GO] |
2025―Oct―07 |
Cell type-specific eQTL analysis of COVID-19 based on single-cell transcriptomic data |
Chao Wang, Xinyu Chen, Sainan Zhang, Zijun Zhu, Meiyu Du, Guanzhi He, Senwei Tan, Hailong Li, Duoyi Zhang, Jingqiao Bai, Liang Cheng |
| 2 |
[GO] |
2024―Dec―19 |
SARS-CoV-2 Illumina GeNome Assembly Line (SIGNAL), a Snakemate workflow for rapid and bulk analysis of Illumina sequencing of SARS-CoV-2 genomes |
Jalees A Nasir, Finlay Maguire, Kendrick M Smith, Emily M Panousis, Sheridan J C Baker, Patryk Aftanas, Amogelang R Raphenya, Brian P Alcock, Hassaan Maan, Natalie C Knox, Arinjay Banerjee, Karen Mossman, Bo Wang, Jared T Simpson, Robert A Kozak, Samira Mubareka, Andrew G McArthur |
| 3 |
[GO] |
2024―Nov―12 |
Refining SARS-CoV-2 intra-host variation by leveraging large-scale sequencing data |
Fatima Mostefai, Jean-Christophe Grenier, Raphaël Poujol, Julie Hussin |
| 4 |
[GO] |
2024―May―16 |
From RNA sequence to its three-dimensional structure: geometrical structure, stability and dynamics of selected fragments of SARS-CoV-2 RNA |
Leonid Gorb, Ivan Voiteshenko, Vasyl Hurmach, Margarita Zarudnaya, Alex Nyporko, Tetiana Shyryna, Maksym Platonov, Szczepan Roszak, Bakhtiyor Rasulev |
| 5 |
[GO] |
2024―Feb―29 |
Cell-specific housekeeping role of lncRNAs in COVID-19-infected and recovered patients |
Partha Chattopadhyay, Priyanka Mehta, Jyoti Soni, Kishore Tardalkar, Meghnad Joshi, Rajesh Pandey |
| 6 |
[GO] |
2024―Feb―02 |
A simple method for estimating time-irreversible nucleotide substitution rates in the SARS-CoV-2 genome |
Kazuharu Misawa, Ryo Ootsuki |
| 7 |
[GO] |
2023―Oct―18 |
Elevated A-to-I RNA editing in COVID-19 infected individuals |
Rona Merdler-Rabinowicz, David Gorelik, Jiwoon Park, Cem Meydan, Jonathan Foox, Miriam Karmon, Hillel S Roth, Roni Cohen-Fultheim, Galit Shohat-ophir, Eli Eisenberg, Eytan Ruppin, Christopher E Mason, Erez Y Levanon |
| 8 |
[GO] |
2023―Apr―24 |
SARS2Mutant: SARS-CoV-2 amino-acid mutation atlas database |
Karim Rahimian, Ehsan Arefian, Bahar Mahdavi, Mohammadamin Mahmanzar, Donna Lee Kuehu, Youping Deng |
| 9 |
[GO] |
2023―Jan―20 |
Faster SARS-CoV-2 sequence validation and annotation for GenBank using VADR |
Eric P Nawrocki |
| 10 |
[GO] |
2022―Aug―22 |
A computational approach to rapidly design peptides that detect SARS-CoV-2 surface protein S |
Maryam Hajikarimlou, Mohsen Hooshyar, Mohamed Taha Moutaoufik, Khaled A Aly, Taha Azad, Sarah Takallou, Sasi Jagadeesan, Sadhna Phanse, Kamaledin B Said, Bahram Samanfar, John C Bell, Frank Dehne, Mohan Babu, Ashkan Golshani |
| 11 |
[GO] |
2021―May―22 |
A map of the SARS-CoV-2 RNA structurome |
Ryan J Andrews, Collin A O’Leary, Van S Tompkins, Jake M Peterson, Hafeez S Haniff, Christopher Williams, Matthew D Disney, Walter N Moss |
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